Index

A | B | C | D | E | F | G | H | I | J | K | L | M | N | O | P | R | S | T | U | V | W

A

AC() (in module pyfusion.data.process_swept_Langmuir)
(in module pyfusion.data.process_swept_Langmuir_1)
add() (pyfusion.data.base.BaseDataSet method)
(pyfusion.data.plots.Energy method)
(pyfusion.data.plots_1.Energy method)
add_coords() (pyfusion.data.base.Coords method)
add_query_to_url() (in module pyfusion.acquisition.MDSPlus.h1ds)
add_reg_func() (pyfusion.orm.ORMManager method)
all_tests_specgram() (in module pyfusion.data.specgram_fftw3)
amoeba() (in module pyfusion.data.amoeba)
analytic_phase() (in module pyfusion.data.signal_processing)
analytic_signal() (in module pyfusion.data.restore_sin)
append() (pyfusion.data.base.BaseOrderedDataSet method)
(pyfusion.data.DA_datamining.DA method)
append_to_DA_file() (in module pyfusion.data.DA_datamining)
askif() (in module pyfusion.clustering.modes)
(in module pyfusion.clustering.modes_old)

B

BaseAcquisition (class in pyfusion.acquisition.base), [1]
BaseCoordTransform (class in pyfusion.data.base)
BaseData (class in pyfusion.data.base)
BaseDataFetcher (class in pyfusion.acquisition.base), [1]
BaseDataSet (class in pyfusion.data.base)
BaseOrderedDataSet (class in pyfusion.data.base)
BasePyfusionTestCase (class in pyfusion.test.tests)
between() (in module pyfusion.data.convenience)
bin2list() (in module pyfusion.data.utils)
BinaryAcquisition (class in pyfusion.acquisition.binary.acq)
BinaryMultiChannelTimeseriesFetcher (class in pyfusion.acquisition.binary.fetch)
broaden() (in module pyfusion.data.convenience)
broken (pyfusion.data.tests.CheckPlotSignals attribute)
btw() (in module pyfusion.data.convenience)
busted (pyfusion.devices.H1.tests.CheckH1MirnovCoords attribute)
bw() (in module pyfusion.data.convenience)

C

call_igetfile() (in module pyfusion.acquisition.LHD.read_igetfile)
CannotImportFromConfigError() (in module pyfusion.conf.utils)
Channel (class in pyfusion.data.base)
ChannelList (class in pyfusion.data.base)
check_module() (pyfusion.acquisition.tests.CheckAcquisitionModules method)
check_section_syntax() (pyfusion.conf.PyfusionConfigParser method)
check_section_types() (pyfusion.conf.PyfusionConfigParser method)
CheckAcquisitionArgs (class in pyfusion.acquisition.tests)
CheckAcquisitionModules (class in pyfusion.acquisition.tests)
CheckBinaryAcquisition (class in pyfusion.acquisition.binary.test)
CheckBinaryMultiFileFetch (class in pyfusion.acquisition.binary.test)
CheckChannelList (class in pyfusion.data.tests)
CheckChannels (class in pyfusion.data.tests)
CheckChannelsSQL (class in pyfusion.data.tests)
CheckConfigFileSectionNames (class in pyfusion.conf.tests)
CheckConfigUtils (class in pyfusion.conf.tests)
CheckCoordinates (class in pyfusion.data.tests)
CheckDataFetchers (class in pyfusion.acquisition.tests)
CheckDataHistory (class in pyfusion.data.tests)
CheckDataSet (class in pyfusion.data.tests)
CheckDataSetLabels (class in pyfusion.data.tests)
CheckDevice (class in pyfusion.devices.tests)
CheckDSVAcquisition (class in pyfusion.acquisition.DSV.test)
CheckEmptyDevice (class in pyfusion.devices.tests)
CheckEqualExceptFor (class in pyfusion.utils.tests)
CheckFakeDataAcquisition (class in pyfusion.acquisition.FakeData.tests)
CheckFakeDataFetchers (class in pyfusion.acquisition.FakeData.tests)
CheckFilterCopy (class in pyfusion.data.tests)
CheckFilterMetaClass (class in pyfusion.data.tests)
CheckFilters (class in pyfusion.data.tests)
CheckFloatDelta (class in pyfusion.data.tests)
CheckFlucstrucPhases (class in pyfusion.data.tests)
CheckFlucstrucs (class in pyfusion.data.tests)
CheckGetAcquisition (class in pyfusion.acquisition.tests)
CheckGetCoords (class in pyfusion.data.tests)
CheckGetDevice (class in pyfusion.devices.tests)
CheckGetH1Device (class in pyfusion.devices.H1.tests)
CheckH1ConfigSection (class in pyfusion.acquisition.MDSPlus.tests)
CheckH1Device (class in pyfusion.devices.H1.tests)
CheckH1MirnovCoords (class in pyfusion.devices.H1.tests)
CheckImportFromString (class in pyfusion.conf.tests)
CheckImportSetting (class in pyfusion.conf.tests)
CheckKeywordArgConfigHandler (class in pyfusion.conf.tests)
CheckLHDDevice (class in pyfusion.devices.LHD.tests)
CheckMDSPlusDataAcquisition (class in pyfusion.acquisition.MDSPlus.tests)
CheckMDSPlusDataFetchers (class in pyfusion.acquisition.MDSPlus.tests)
CheckMDSPlusH1Connection (class in pyfusion.acquisition.MDSPlus.tests)
CheckMultiChannel (class in pyfusion.acquisition.FakeData.tests)
CheckNormalise (class in pyfusion.data.tests)
CheckNumpyFilters (class in pyfusion.data.tests)
CheckOrderedDataSet (class in pyfusion.data.tests)
CheckORM (class in pyfusion.orm.tests)
CheckORMManager (class in pyfusion.orm.tests)
CheckPing (class in pyfusion.utils.tests)
CheckPlotMethods (class in pyfusion.data.tests)
CheckPlotSignals (class in pyfusion.data.tests)
CheckPyfusionConfigParser (class in pyfusion.conf.tests)
CheckRemoveNonContiguousFilter (class in pyfusion.data.tests)
CheckSciPyFilters (class in pyfusion.data.tests)
CheckSegmentFilter (class in pyfusion.data.tests)
CheckShotFlucstrucs (class in pyfusion.data.tests)
CheckSignal (class in pyfusion.data.tests)
CheckStoredMetaData (class in pyfusion.data.tests)
CheckStoredMetaDataForDataSets (class in pyfusion.data.tests)
CheckSubtractMeanFilter (class in pyfusion.data.tests)
CheckTimebase (class in pyfusion.data.tests)
CheckTimeseriesData (class in pyfusion.data.tests)
CheckUtils (class in pyfusion.data.tests)
CheckVariableTypes (class in pyfusion.conf.tests)
chunk_plot() (in module pyfusion.visual.chunk_plot)
clear_config() (in module pyfusion.conf.utils)
close_matching() (in module pyfusion.visual.window_manager)
cluster() (pyfusion.clustering.clustering.feature_object method)
cluster_probabilities() (pyfusion.clustering.clustering.clustering_object method)
clusterer_wrapper (class in pyfusion.clustering.clustering)
clustering_object (class in pyfusion.clustering.clustering)
cm() (in module pyfusion.visual.window_manager)
combine_feature_sets() (in module pyfusion.clustering.extract_features_scans)
compact_str() (in module pyfusion.utils.utils)
compare_several_clusters() (in module pyfusion.clustering.clustering)
compare_several_kappa_values() (in module pyfusion.clustering.clustering)
compare_two_cluster_results() (in module pyfusion.clustering.clustering)
ConfigCheck (class in pyfusion.test.tests)
ConfigLoaders (class in pyfusion.test.tests)
ConfigSectionSyntaxError
convert_DA_file() (in module pyfusion.clustering.clustering)
convert_kappa_std() (in module pyfusion.clustering.clustering)
CoordHD (class in pyfusion.data.histogramHD)
CoordHDs (class in pyfusion.data.histogramHD)
Coords (class in pyfusion.data.base)
copy() (in module pyfusion.data.filters)
(pyfusion.data.base.BaseDataSet method)
(pyfusion.data.base.DataSet method)
(pyfusion.data.timeseries.TimeseriesData method)
copyda() (pyfusion.data.DA_datamining.DA method)
correlate() (in module pyfusion.data.filters)
(pyfusion.data.timeseries.TimeseriesData method)
cps() (in module pyfusion.data.filters)
(in module pyfusion.data.utils)
cross_correl() (in module pyfusion.data.signal_processing)

D

DA (class in pyfusion.data.DA_datamining)
da() (in module pyfusion.data.DA_datamining)
data (pyfusion.acquisition.LHD.read_igetfile.igetfile attribute)
data_from_mds() (in module pyfusion.acquisition.MDSPlus.h1ds)
data_from_url() (in module pyfusion.acquisition.MDSPlus.h1ds)
database_of_scans() (in module pyfusion.devices.H1.H1_scan_list)
(in module pyfusion.H1_scan_list_old)
DataSet (class in pyfusion.data.base)
debug_() (in module pyfusion.data.write_arff)
(in module pyfusion.debug_)
(in module pyfusion.utils.read_csv_data)
decimate() (in module pyfusion.data.convenience)
(in module pyfusion.utils.utils)
dev (pyfusion.acquisition.DSV.test.CheckDSVAcquisition attribute)
(pyfusion.acquisition.MDSPlus.tests.TestWebDataAcq attribute)
(pyfusion.data.tests.CheckFilterCopy attribute)
(pyfusion.devices.H1.tests.CheckGetH1Device attribute)
(pyfusion.devices.tests.TestDeviceGetdata attribute)
(pyfusion.test.tests.SQLConfigCheck attribute)
Device (class in devices.base)
(class in pyfusion.devices.base)
devices (module)
devices.base (module)
devices.H1.device (module)
diff() (in module pyfusion.conf.utils)
DisallowedSectionType
discretise_array() (in module pyfusion.data.save_compress)
discretise_signal() (in module pyfusion.data.save_compress)
dist_mp() (in module pyfusion.utils.dist_mp)
do_fetch() (pyfusion.acquisition.base.BaseDataFetcher method), [1]
(pyfusion.acquisition.DSV.fetch.DSVMultiChannelTimeseriesFetcher method)
(pyfusion.acquisition.HeliotronJ.fetch.HeliotronJDataFetcher method)
(pyfusion.acquisition.LHD.fetch.LHDIgetfileReader method)
(pyfusion.acquisition.LHD.fetch.LHDTimeseriesDataFetcher method)
(pyfusion.acquisition.LHD.fetch_local.LHDTimeseriesDataFetcher method)
(pyfusion.acquisition.LHD.fetch_local_tmp.LHDTimeseriesDataFetcher method)
(pyfusion.acquisition.MDSPlus.tests.DummyMDSDataFetcher method)
(pyfusion.acquisition.TJII.fetch.TJIIDataFetcher method)
(pyfusion.acquisition.W7X.fetch.W7XDataFetcher method)
(pyfusion.acquisition.binary.fetch.BinaryMultiChannelTimeseriesFetcher method)
(pyfusion.acquisition.binary.fetch.MultiFileBinaryMultiChannelTimeseriesFetcher method)
(pyfusion.acquisition.tests.DummyFetcher method)
do_test() (in module pyfusion.acquisition.MDSPlus.h1ds)
downsample() (in module pyfusion.data.filters)
(pyfusion.data.timeseries.TimeseriesData method)
DSVAcquisition (class in pyfusion.acquisition.DSV.acq), [1]
DSVMultiChannelTimeseriesFetcher (class in pyfusion.acquisition.DSV.fetch), [1]
Dummy (class in pyfusion.utils.tests)
DummyCoordTransform (class in pyfusion.data.tests)
DummyFetcher (class in pyfusion.acquisition.tests)
DummyMDSData (class in pyfusion.acquisition.MDSPlus.tests)
DummyMDSDataFetcher (class in pyfusion.acquisition.MDSPlus.tests)
dummysig (class in pyfusion.data.filters)
dump() (in module pyfusion.conf.utils)
dump_data() (pyfusion.clustering.clustering.feature_object method)
DynamicDataSet (class in pyfusion.data.base)

E

EM_GMM_calc_best_fit() (in module pyfusion.clustering.clustering)
EM_GMM_clustering() (in module pyfusion.clustering.clustering)
EM_GMM_clustering_class (class in pyfusion.clustering.clustering)
EM_GMM_clustering_wrapper() (in module pyfusion.clustering.clustering)
EM_GMM_clustering_wrapper2() (in module pyfusion.clustering.clustering)
EM_VMM_calc_best_fit() (in module pyfusion.clustering.clustering)
EM_VMM_calc_best_fit_optimise() (in module pyfusion.clustering.clustering)
EM_VMM_clustering() (in module pyfusion.clustering.clustering)
EM_VMM_clustering_class (class in pyfusion.clustering.clustering)
EM_VMM_clustering_soft() (in module pyfusion.clustering.clustering)
EM_VMM_clustering_wrapper() (in module pyfusion.clustering.clustering)
EM_VMM_clustering_wrapper2() (in module pyfusion.clustering.clustering)
EM_VMM_GMM_clustering_class (class in pyfusion.clustering.clustering)
EM_VMM_GMM_clustering_wrapper() (in module pyfusion.clustering.clustering)
EM_VMM_GMM_clustering_wrapper2() (in module pyfusion.clustering.clustering)
Energy (class in pyfusion.data.plots)
(class in pyfusion.data.plots_1)
equal_except_for() (in module pyfusion.utils.debug)
error_fun() (pyfusion.data.process_swept_Langmuir.LPfitter method)
(pyfusion.data.process_swept_Langmuir_1.LPfitter method)
error_info() (pyfusion.acquisition.base.BaseDataFetcher method), [1]
(pyfusion.acquisition.LHD.fetch.LHDBaseDataFetcher method)
estimate_error() (in module pyfusion.data.LPextra)
extract() (pyfusion.data.DA_datamining.DA method)
extract_data_by_picking_peaks() (in module pyfusion.clustering.extract_features_scans)

F

FakeDataAcquisition (class in pyfusion.acquisition.FakeData.acq), [1]
feature_object (class in pyfusion.clustering.clustering)
fetch() (pyfusion.acquisition.base.BaseDataFetcher method), [1]
(pyfusion.acquisition.FakeData.fetch.SingleChannelSineFetcher method)
(pyfusion.acquisition.FakeData.fetch.SingleChannelSineUniqueForShotFetcher method)
(pyfusion.acquisition.base.MultiChannelFetcher method), [1]
fft_time_estimate() (in module pyfusion.utils.primefactors)
file_info (in module pyfusion.acquisition.HeliotronJ.get_basic_diagnostics)
filename (pyfusion.acquisition.LHD.read_igetfile.igetfile attribute)
filter_by_kappa_cutoff() (in module pyfusion.clustering.extract_features_scans)
filter_fourier_bandpass() (in module pyfusion.data.filters)
(pyfusion.data.timeseries.TimeseriesData method)
find_clipped() (in module pyfusion.data.process_swept_Langmuir)
(in module pyfusion.data.process_swept_Langmuir_1)
find_data() (in module pyfusion.acquisition.read_text_pyfusion)
find_eps() (in module pyfusion.data.histogramHD)
find_helio_exe() (in module pyfusion.acquisition.HeliotronJ.make_static_param_db)
find_last_shot() (in module pyfusion.utils.utils)
find_missing_shots() (in module pyfusion.devices.H1.H1_scan_list)
(in module pyfusion.H1_scan_list_old)
find_peaks() (in module pyfusion.clustering.extract_features_scans)
(in module pyfusion.data.utils)
find_shot_times() (in module pyfusion.data.pyfusion_sigproc)
find_signal_spectral_peaks() (in module pyfusion.data.utils)
find_subclasses() (in module pyfusion.test.tests)
find_valid_for_shot() (pyfusion.acquisition.base.BaseDataFetcher method), [1]
findZero() (in module pyfusion.data.plots)
(in module pyfusion.data.plots_1)
fit() (pyfusion.data.process_swept_Langmuir.LPfitter method)
fit_one_swept_Langmuir() (pyfusion.data.process_swept_Langmuir_1.Langmuir_data method)
fit_swept_Langmuir_seg_chan() (pyfusion.data.process_swept_Langmuir.Langmuir_data method)
fit_swept_Langmuir_seg_multi() (pyfusion.data.process_swept_Langmuir.Langmuir_data method)
fit_vonMises() (pyfusion.clustering.clustering.clustering_object method)
fitbiexp() (in module pyfusion.data.fits)
(in module pyfusion.data.fits0)
(in module pyfusion.data.fits1)
fitgauss() (in module pyfusion.data.fits)
(in module pyfusion.data.fits0)
(in module pyfusion.data.fits1)
fitmirexp() (in module pyfusion.data.fits)
(in module pyfusion.data.fits0)
(in module pyfusion.data.fits1)
fix2pi_skips() (in module pyfusion.utils.utils)
fixup() (in module pyfusion.data.process_swept_Langmuir)
FloatDelta (class in pyfusion.data.base)
FlucStruc (class in pyfusion.data.timeseries)
flucstruc() (in module pyfusion.data.filters)
(pyfusion.data.timeseries.TimeseriesData method)
fs_group_geometric() (in module pyfusion.data.filters)
fs_group_threshold() (in module pyfusion.data.filters)
fsplot_phase() (in module pyfusion.data.plots)
(in module pyfusion.data.plots_1)
(pyfusion.data.timeseries.FlucStruc method)

G

gaus() (in module pyfusion.data.fits)
(in module pyfusion.data.fits0)
(in module pyfusion.data.fits1)
generate_artificial_data() (in module pyfusion.clustering.clustering)
generate_bessel_lookup_table() (pyfusion.clustering.clustering.EM_VMM_clustering_class method)
(pyfusion.clustering.clustering.EM_VMM_GMM_clustering_class method)
generate_timebase() (in module pyfusion.data.timeseries)
generic_ch() (in module pyfusion.acquisition.binary.fetch)
(in module pyfusion.acquisition.DSV.fetch)
get() (pyfusion.data.histogramHD.CoordHD method)
(pyfusion.data.histogramHD.CoordHDs method)
get_acq_from_config() (in module pyfusion.acquisition.utils)
get_all_shots() (in module pyfusion.devices.H1.H1_scan_list)
(in module pyfusion.H1_scan_list_old)
get_array_data() (in module pyfusion.clustering.extract_features_scans)
get_axes_pixcells() (in module pyfusion.data.utils)
get_basic_diagnostics() (in module pyfusion.acquisition.H1.get_basic_diagnostics)
(in module pyfusion.acquisition.HeliotronJ.get_basic_diagnostics)
(in module pyfusion.acquisition.LHD.get_basic_diagnostics)
get_channel() (pyfusion.data.timeseries.Signal method)
get_channel_index() (pyfusion.data.base.ChannelList method)
get_config_as_dict() (in module pyfusion.conf.utils)
get_coords_for_channel() (in module pyfusion.data.base)
get_delay() (in module pyfusion.acquisition.H1.get_basic_diagnostics)
(in module pyfusion.acquisition.HeliotronJ.get_basic_diagnostics)
(in module pyfusion.acquisition.LHD.get_basic_diagnostics)
get_fftw3_speed() (in module pyfusion.utils.primefactors)
get_flat_top() (in module pyfusion.acquisition.H1.get_basic_diagnostics)
(in module pyfusion.acquisition.HeliotronJ.get_basic_diagnostics)
(in module pyfusion.acquisition.LHD.get_basic_diagnostics)
get_free_bytes() (in module pyfusion.acquisition.LHD.LHD_utils)
get_history_args_string() (in module pyfusion.data.base)
get_hj_modules() (in module pyfusion.acquisition.HeliotronJ.get_hj_modules)
get_iprobe() (pyfusion.data.process_swept_Langmuir.Langmuir_data method)
(pyfusion.data.process_swept_Langmuir_1.Langmuir_data method)
get_local_shot_numbers() (in module pyfusion.utils.utils)
get_mag_config() (in module pyfusion.acquisition.W7X.mag_config)
get_multimode_test_data() (in module pyfusion.data.tests)
get_n_channels() (in module pyfusion.data.tests)
get_optimum_time_range() (in module pyfusion.data.filters)
get_puff() (in module pyfusion.acquisition.W7X.puff_db)
get_results() (pyfusion.utils.dist_mp.ThreadWorker method)
get_scan_keys() (in module pyfusion.devices.H1.H1_scan_list)
(in module pyfusion.H1_scan_list_old)
get_shot_info() (in module pyfusion.acquisition.W7X.get_shot_info)
get_shot_utc() (in module pyfusion.acquisition.W7X.get_shot_info)
get_shotDA() (in module pyfusion.acquisition.W7X.get_shot_list)
get_static_params() (in module pyfusion.acquisition.HeliotronJ.make_static_param_db)
get_version() (in module pyfusion.version)
getAcquisition() (in module pyfusion.acquisition.utils)
getdata() (pyfusion.acquisition.base.BaseAcquisition method), [1]
(pyfusion.devices.base.Device method)
getDevice() (in module pyfusion.devices.base)
git_sha() (in module pyfusion.version)

H

H1 (class in devices.H1.device)
(class in pyfusion.devices.H1.device)
h1 (pyfusion.acquisition.MDSPlus.tests.CheckH1ConfigSection attribute)
(pyfusion.acquisition.MDSPlus.tests.CheckMDSPlusDataAcquisition attribute)
(pyfusion.acquisition.MDSPlus.tests.CheckMDSPlusDataFetchers attribute)
(pyfusion.acquisition.MDSPlus.tests.CheckMDSPlusH1Connection attribute)
(pyfusion.devices.H1.tests.CheckH1Device attribute)
(pyfusion.devices.H1.tests.CheckH1MirnovCoords attribute)
H1DevTestCase (class in pyfusion.devices.H1.tests)
H1MDSData (class in pyfusion.acquisition.MDSPlus.h1ds)
HeliotronJ (class in pyfusion.devices.HeliotronJ.device)
HeliotronJAcquisition (class in pyfusion.acquisition.HeliotronJ.acq)
HeliotronJDataFetcher (class in pyfusion.acquisition.HeliotronJ.fetch)
his() (in module pyfusion.data.convenience)
hist() (pyfusion.clustering.modes.Mode method)
(pyfusion.clustering.modes_old.Mode method)
(pyfusion.data.DA_datamining.DA method)
histogramHD() (in module pyfusion.data.histogramHD)
history_reg_method() (in module pyfusion.data.base)
host() (in module pyfusion.utils.host)

I

igetfile (class in pyfusion.acquisition.LHD.read_igetfile)
import_from_str() (in module pyfusion.conf.utils)
import_module() (in module pyfusion.acquisition.HeliotronJ.get_hj_modules)
import_setting() (in module pyfusion.conf.utils)
inds_from_list() (in module pyfusion.data.convenience)
info() (pyfusion.data.DA_datamining.DA method)
info_to_bytes() (in module pyfusion.data.DA_datamining)
initialisation() (pyfusion.clustering.clustering.EM_GMM_clustering_class method)
(pyfusion.clustering.clustering.EM_VMM_GMM_clustering_class method)
(pyfusion.clustering.clustering.EM_VMM_clustering_class method)
InitImports (class in pyfusion.test.tests)
inlist() (in module pyfusion.data.convenience)
input_coords (pyfusion.data.base.BaseCoordTransform attribute)
(pyfusion.data.tests.DummyCoordTransform attribute)
(pyfusion.devices.H1.coords.MirnovKhMagneticCoordTransform attribute)
(pyfusion.devices.LHD.coords.LHDConvenienceCoordTransform attribute)
integrate() (in module pyfusion.data.filters)
(pyfusion.data.timeseries.TimeseriesData method)
is_contiguous() (pyfusion.data.timeseries.Timebase method)

J

join_ends() (in module pyfusion.data.plots)
(in module pyfusion.data.plots_1)
join_segments() (in module pyfusion.visual.multi_line_plot)
json_save_shot_list() (in module pyfusion.acquisition.W7X.get_shot_list)
JT60 (class in pyfusion.devices.JT60.device)

K

k_means_clustering() (in module pyfusion.clustering.clustering)
k_means_periodic() (in module pyfusion.clustering.clustering)
kappa_guess_func() (in module pyfusion.clustering.clustering)
keys() (pyfusion.data.DA_datamining.Masked_DA method)
(pyfusion.data.timeseries.TimeseriesData method)
kwarg_config_handler() (in module pyfusion.conf.utils)

L

Langmuir_data (class in pyfusion.data.process_swept_Langmuir)
(class in pyfusion.data.process_swept_Langmuir_1)
LHD (class in pyfusion.devices.LHD.device)
lhd (pyfusion.acquisition.LHD.tests.TestLHDDataAcq attribute)
(pyfusion.devices.LHD.tests.CheckLHDDevice attribute)
LHD_A14_clk() (in module pyfusion.acquisition.LHD.fetch)
LHDAcquisition (class in pyfusion.acquisition.LHD.acq)
LHDBaseDataFetcher (class in pyfusion.acquisition.LHD.fetch)
(class in pyfusion.acquisition.LHD.fetch_local)
(class in pyfusion.acquisition.LHD.fetch_local_tmp)
LHDConvenienceCoordTransform (class in pyfusion.devices.LHD.coords)
LHDDeviceTestCase (class in pyfusion.devices.LHD.tests)
LHDIgetfileReader (class in pyfusion.acquisition.LHD.fetch)
LHDTimeseriesDataFetcher (class in pyfusion.acquisition.LHD.fetch), [1]
(class in pyfusion.acquisition.LHD.fetch_local)
(class in pyfusion.acquisition.LHD.fetch_local_tmp)
list2bin() (in module pyfusion.data.utils)
load() (pyfusion.data.DA_datamining.DA method)
load_data() (pyfusion.clustering.clustering.feature_object method)
load_from_config() (pyfusion.data.base.Coords method)
load_orm() (pyfusion.orm.ORMManager method)
load_transform() (pyfusion.data.base.Coords method)
load_wisdom() (in module pyfusion.utils.fftw3_bdb_utils)
localigetfilepath (in module pyfusion.acquisition.H1.get_basic_diagnostics)
(in module pyfusion.acquisition.HeliotronJ.get_basic_diagnostics)
(in module pyfusion.acquisition.LHD.get_basic_diagnostics)
LPchar() (pyfusion.data.process_swept_Langmuir.LPfitter method)
(pyfusion.data.process_swept_Langmuir_1.LPfitter method)
lpfilter() (in module pyfusion.data.LPextra)
LPfit() (in module pyfusion.data.process_swept_Langmuir_1)
LPfitter (class in pyfusion.data.process_swept_Langmuir)
(class in pyfusion.data.process_swept_Langmuir_1)

M

make_attributes() (pyfusion.data.DA_datamining.DA method)
make_grid_subplots() (in module pyfusion.clustering.clustering)
make_mask() (in module pyfusion.data.filters)
make_mode_list() (pyfusion.clustering.clustering.clustering_object method)
make_param_db() (in module pyfusion.acquisition.HeliotronJ.make_static_param_db)
make_rsync_list() (in module pyfusion.devices.H1.H1_scan_list)
(in module pyfusion.H1_scan_list_old)
make_title() (in module pyfusion.data.utils)
map_kappa_h_mag_angle() (in module pyfusion.devices.H1.coords)
Masked_DA (class in pyfusion.data.DA_datamining)
mds (pyfusion.acquisition.MDSPlus.tests.CheckH1ConfigSection attribute)
(pyfusion.acquisition.MDSPlus.tests.CheckMDSPlusDataAcquisition attribute)
(pyfusion.acquisition.MDSPlus.tests.CheckMDSPlusDataFetchers attribute)
(pyfusion.acquisition.MDSPlus.tests.CheckMDSPlusH1Connection attribute)
(pyfusion.data.tests.CheckPlotSignals attribute)
(pyfusion.devices.H1.tests.CheckH1Device attribute)
(pyfusion.devices.H1.tests.CheckH1MirnovCoords attribute)
MDSAcqTestCase (class in pyfusion.acquisition.MDSPlus.tests)
MDSPlusAcquisition (class in pyfusion.acquisition.MDSPlus.acq), [1]
members() (pyfusion.clustering.clustering.clustering_object method)
merge_ds() (in module pyfusion.acquisition.read_text_pyfusion)
MetaMethods (class in pyfusion.data.base)
MirnovKhMagneticCoordTransform (class in pyfusion.devices.H1.coords)
Mode (class in pyfusion.clustering.modes)
(class in pyfusion.clustering.modes_old)
modtwopi() (in module pyfusion.clustering.clustering)
(in module pyfusion.utils.utils)
multi_stft() (in module pyfusion.clustering.extract_features_scans)
multi_svd() (in module pyfusion.clustering.extract_features_scans)
MultiChannelFetcher (class in pyfusion.acquisition.base), [1]
MultiFileBinaryMultiChannelTimeseriesFetcher (class in pyfusion.acquisition.binary.fetch)
mybiexp() (in module pyfusion.data.fits)
(in module pyfusion.data.fits0)
(in module pyfusion.data.fits1)
mydiff() (in module pyfusion.data.plots)
mygauss() (in module pyfusion.data.fits)
(in module pyfusion.data.fits0)
(in module pyfusion.data.fits1)
myhist() (in module pyfusion.acquisition.W7X.fetch)
myiden() (in module pyfusion.data.plots)
myiden2() (in module pyfusion.data.plots)
mylen() (in module pyfusion.data.DA_datamining)
mymirexp() (in module pyfusion.data.fits)
(in module pyfusion.data.fits0)
(in module pyfusion.data.fits1)

N

n_channels() (pyfusion.data.timeseries.Signal method)
n_samples() (pyfusion.data.timeseries.Signal method)
named_ch() (in module pyfusion.acquisition.binary.fetch)
net (pyfusion.acquisition.MDSPlus.tests.CheckH1ConfigSection attribute)
(pyfusion.acquisition.MDSPlus.tests.CheckMDSPlusDataAcquisition attribute)
(pyfusion.acquisition.MDSPlus.tests.CheckMDSPlusDataFetchers attribute)
(pyfusion.acquisition.MDSPlus.tests.CheckMDSPlusH1Connection attribute)
(pyfusion.acquisition.MDSPlus.tests.TestRefactoredMDSThick attribute)
(pyfusion.acquisition.MDSPlus.tests.TestRefactoredMDSThin attribute)
(pyfusion.acquisition.MDSPlus.tests.TestWebDataAcq attribute)
(pyfusion.devices.H1.tests.CheckH1Device attribute)
(pyfusion.devices.H1.tests.CheckH1MirnovCoords attribute)
(pyfusion.devices.LHD.tests.CheckLHDDevice attribute)
new_method() (in module pyfusion.clustering.clustering)
newload() (in module pyfusion.acquisition.LHD.fetch_local_tmp)
(in module pyfusion.data.save_compress)
newloadv3() (in module pyfusion.acquisition.base)
next_nice_number() (in module pyfusion.data.filters)
next_shot() (in module pyfusion.data.shot_range)
nice_FFT_size() (in module pyfusion.utils.primefactors)
nice_FFT_size_above() (in module pyfusion.utils.primefactors)
normalise() (in module pyfusion.data.filters)
(pyfusion.data.base.DataSet method)
(pyfusion.data.timeseries.TimeseriesData method)
normalise_freq() (pyfusion.data.timeseries.Timebase method)
NoSQLTestCase (class in pyfusion.test.tests)

O

off() (in module pyfusion.visual.sp)
old_std() (pyfusion.clustering.modes.Mode method)
on() (in module pyfusion.visual.sp)
one_rms() (pyfusion.clustering.modes.Mode method)
(pyfusion.clustering.modes_old.Mode method)
optimise_fit() (in module pyfusion.utils.primefactors)
ordered_channel_names() (pyfusion.acquisition.base.MultiChannelFetcher method), [1]
OrderedDataSet (class in pyfusion.data.base)
OrderedDataSetItem (class in pyfusion.data.base)
orm_load_basedata() (in module pyfusion.data.base)
orm_load_basedataset() (in module pyfusion.data.base)
orm_load_baseordereddataset() (in module pyfusion.data.base)
orm_load_channel() (in module pyfusion.data.base)
orm_load_channel_map() (in module pyfusion.data.base)
orm_load_channellist() (in module pyfusion.data.base)
orm_load_dataset() (in module pyfusion.data.base)
orm_load_devices() (in module pyfusion.devices.base)
orm_load_dynamic_dataset() (in module pyfusion.data.base)
orm_load_floatdelta() (in module pyfusion.data.base)
orm_load_flucstrucs() (in module pyfusion.data.timeseries)
orm_load_h1device() (in module pyfusion.devices.H1.device)
orm_load_heliotronjdevice() (in module pyfusion.devices.HeliotronJ.device)
orm_load_jt60device() (in module pyfusion.devices.JT60.device)
orm_load_lhddevice() (in module pyfusion.devices.LHD.device)
orm_load_svd_data() (in module pyfusion.data.timeseries)
orm_load_timeseries_data() (in module pyfusion.data.timeseries)
orm_load_tjiidevice() (in module pyfusion.devices.TJII.device)
orm_load_w7asdevice() (in module pyfusion.devices.W7AS.device)
orm_load_W7Xdevice() (in module pyfusion.devices.W7X.device)
orm_register() (in module pyfusion.orm.utils)
ORMManager (class in pyfusion.orm)
output_coords (pyfusion.data.base.BaseCoordTransform attribute)
(pyfusion.data.tests.DummyCoordTransform attribute)
(pyfusion.devices.H1.coords.MirnovKhMagneticCoordTransform attribute)
(pyfusion.devices.LHD.coords.LHDConvenienceCoordTransform attribute)
overlap() (in module pyfusion.data.plots)

P

params_to_dict() (in module pyfusion.acquisition.HeliotronJ.make_static_param_db)
peak_freq() (in module pyfusion.data.utils)
perform_data_datamining() (in module pyfusion.clustering.extract_features_scans)
persevere_with() (in module pyfusion.acquisition.LHD.fetch)
pf_get() (pyfusion.conf.PyfusionConfigParser method)
pf_has_option() (pyfusion.conf.PyfusionConfigParser method)
pf_has_section() (pyfusion.conf.PyfusionConfigParser method)
pf_options() (pyfusion.conf.PyfusionConfigParser method)
PfMetaData (class in pyfusion.data.base)
PfTestBase (class in pyfusion.test.tests)
ping() (in module pyfusion.utils.net)
plot() (pyfusion.acquisition.LHD.read_igetfile.igetfile method)
(pyfusion.acquisition.MDSPlus.h1ds.Signal method)
(pyfusion.clustering.modes.Mode method)
(pyfusion.clustering.modes_old.Mode method)
(pyfusion.data.DA_datamining.DA method)
plot_alfven_lines_func() (in module pyfusion.clustering.clustering)
plot_clusters_amp_lines() (pyfusion.clustering.clustering.clustering_object method)
plot_clusters_phase_lines() (pyfusion.clustering.clustering.clustering_object method)
plot_cumulative_phases() (pyfusion.clustering.clustering.clustering_object method)
plot_dimension_histograms() (pyfusion.clustering.clustering.clustering_object method)
plot_dimension_histograms_amps() (pyfusion.clustering.clustering.clustering_object method)
plot_EMM_GMM_amps() (pyfusion.clustering.clustering.clustering_object method)
plot_fft_amp_lines() (pyfusion.clustering.clustering.clustering_object method)
plot_fs_groups() (in module pyfusion.data.plots)
(in module pyfusion.data.plots_1)
(pyfusion.data.timeseries.SVDData method)
plot_interferometer_channels() (pyfusion.clustering.clustering.clustering_object method)
plot_kh_freq_all_clusters() (pyfusion.clustering.clustering.clustering_object method)
plot_phase_vs_phase() (pyfusion.clustering.clustering.clustering_object method)
plot_signals() (in module pyfusion.data.plots)
(in module pyfusion.data.plots_1)
(pyfusion.data.timeseries.TimeseriesData method)
plot_single_kh() (pyfusion.clustering.clustering.clustering_object method)
plot_spectrogram() (in module pyfusion.data.plots)
(in module pyfusion.data.plots_1)
(pyfusion.data.timeseries.TimeseriesData method)
plot_time_freq_all_clusters() (pyfusion.clustering.clustering.clustering_object method)
plot_trim() (in module pyfusion.acquisition.W7X.mag_config)
plot_VM_distributions() (pyfusion.clustering.clustering.clustering_object method)
plotchar() (pyfusion.data.process_swept_Langmuir.LPfitter method)
(pyfusion.data.process_swept_Langmuir_1.LPfitter method)
plotdfdt() (in module pyfusion.acquisition.process_chirps)
pop() (pyfusion.data.base.BaseDataSet method)
posNegFill() (in module pyfusion.data.plots)
(in module pyfusion.data.plots_1)
powerof2() (in module pyfusion.data.signal_processing)
prepare_sweeps() (pyfusion.data.process_swept_Langmuir.Langmuir_data method)
(pyfusion.data.process_swept_Langmuir_1.Langmuir_data method)
primefactors() (in module pyfusion.utils.primefactors)
primesfrom2to2() (in module pyfusion.utils.primefactors)
print_cluster_details() (pyfusion.clustering.clustering.feature_object method)
process_chirps() (in module pyfusion.acquisition.process_chirps)
process_chirps_m_shot() (in module pyfusion.acquisition.process_chirps)
process_cmd_line_args() (in module pyfusion.utils.process_cmd_line_args)
process_constant_Langmuir() (pyfusion.data.process_swept_Langmuir.Langmuir_data method)
process_file_name() (in module pyfusion.data.DA_datamining)
process_swept_Langmuir() (pyfusion.data.process_swept_Langmuir.Langmuir_data method)
(pyfusion.data.process_swept_Langmuir_1.Langmuir_data method)
puffadd() (in module pyfusion.acquisition.W7X.puff_db)
pulldown() (pyfusion.acquisition.base.BaseDataFetcher method), [1]
(pyfusion.acquisition.tests.DummyFetcher method)
purge_old() (in module pyfusion.acquisition.LHD.LHD_utils)
pyfusion.acquisition (module), [1]
pyfusion.acquisition.base (module)
pyfusion.acquisition.binary (module)
pyfusion.acquisition.binary.acq (module)
pyfusion.acquisition.binary.fetch (module)
pyfusion.acquisition.binary.test (module)
pyfusion.acquisition.DSV (module), [1]
pyfusion.acquisition.DSV.acq (module)
pyfusion.acquisition.DSV.fetch (module)
pyfusion.acquisition.DSV.test (module)
pyfusion.acquisition.FakeData (module), [1]
pyfusion.acquisition.FakeData.acq (module)
pyfusion.acquisition.FakeData.fetch (module)
pyfusion.acquisition.FakeData.tests (module)
pyfusion.acquisition.H1 (module), [1]
pyfusion.acquisition.H1.get_basic_diagnostics (module)
pyfusion.acquisition.HeliotronJ (module)
pyfusion.acquisition.HeliotronJ.acq (module)
pyfusion.acquisition.HeliotronJ.fetch (module)
pyfusion.acquisition.HeliotronJ.get_basic_diagnostics (module)
pyfusion.acquisition.HeliotronJ.get_hj_modules (module)
pyfusion.acquisition.HeliotronJ.make_static_param_db (module)
pyfusion.acquisition.HeliotronJ.manual_recompile (module)
pyfusion.acquisition.LHD (module), [1]
pyfusion.acquisition.LHD.acq (module)
pyfusion.acquisition.LHD.fetch (module)
pyfusion.acquisition.LHD.fetch_local (module)
pyfusion.acquisition.LHD.fetch_local_tmp (module)
pyfusion.acquisition.LHD.get_basic_diagnostics (module)
pyfusion.acquisition.LHD.LHD_utils (module)
pyfusion.acquisition.LHD.read_igetfile (module)
pyfusion.acquisition.LHD.tests (module)
pyfusion.acquisition.MDSPlus (module), [1]
pyfusion.acquisition.MDSPlus.acq (module)
pyfusion.acquisition.MDSPlus.h1ds (module)
pyfusion.acquisition.MDSPlus.tests (module)
pyfusion.acquisition.process_chirps (module)
pyfusion.acquisition.read_text_pyfusion (module)
pyfusion.acquisition.tests (module)
pyfusion.acquisition.TJII (module)
pyfusion.acquisition.TJII.acq (module)
pyfusion.acquisition.TJII.fetch (module)
pyfusion.acquisition.utils (module)
pyfusion.acquisition.W7X (module)
pyfusion.acquisition.W7X.acq (module)
pyfusion.acquisition.W7X.fetch (module)
pyfusion.acquisition.W7X.get_shot_info (module)
pyfusion.acquisition.W7X.get_shot_list (module)
pyfusion.acquisition.W7X.mag_config (module)
pyfusion.acquisition.W7X.puff_db (module)
pyfusion.clustering (module)
pyfusion.clustering.clustering (module)
pyfusion.clustering.extract_features_scans (module)
pyfusion.clustering.modes (module)
pyfusion.clustering.modes_old (module)
pyfusion.conf (module)
pyfusion.conf.exceptions (module)
pyfusion.conf.tests (module)
pyfusion.conf.utils (module)
pyfusion.data (module)
pyfusion.data.amoeba (module)
pyfusion.data.base (module)
pyfusion.data.convenience (module)
pyfusion.data.DA_datamining (module)
pyfusion.data.filters (module)
pyfusion.data.fits (module)
pyfusion.data.fits0 (module)
pyfusion.data.fits1 (module)
pyfusion.data.histogramHD (module)
pyfusion.data.LPextra (module)
pyfusion.data.plots (module)
pyfusion.data.plots_1 (module)
pyfusion.data.process_swept_Langmuir (module)
pyfusion.data.process_swept_Langmuir_1 (module)
pyfusion.data.pyfusion_sigproc (module)
pyfusion.data.restore_sin (module)
pyfusion.data.save_compress (module)
pyfusion.data.shot_range (module)
pyfusion.data.signal_processing (module)
pyfusion.data.specgram_fftw3 (module)
pyfusion.data.tests (module)
pyfusion.data.timeseries (module)
pyfusion.data.utils (module)
pyfusion.data.write_arff (module)
pyfusion.debug_ (module)
pyfusion.devices.base (module)
pyfusion.devices.H1 (module)
pyfusion.devices.H1.coords (module)
pyfusion.devices.H1.device (module)
pyfusion.devices.H1.H1_scan_list (module)
pyfusion.devices.H1.tests (module)
pyfusion.devices.HeliotronJ (module)
pyfusion.devices.HeliotronJ.device (module)
pyfusion.devices.JT60 (module)
pyfusion.devices.JT60.device (module)
pyfusion.devices.LHD (module)
pyfusion.devices.LHD.coords (module)
pyfusion.devices.LHD.device (module)
pyfusion.devices.LHD.tests (module)
pyfusion.devices.tests (module), [1]
pyfusion.devices.TJII (module)
pyfusion.devices.TJII.device (module)
pyfusion.devices.W7AS (module)
pyfusion.devices.W7AS.device (module)
pyfusion.devices.W7X (module)
pyfusion.devices.W7X.device (module)
pyfusion.H1_scan_list_old (module)
pyfusion.orm (module)
pyfusion.orm.tests (module)
pyfusion.orm.utils (module)
pyfusion.test (module)
pyfusion.test.tests (module), [1]
pyfusion.utils (module)
pyfusion.utils.debug (module)
pyfusion.utils.dist_mp (module)
pyfusion.utils.fftw3_bdb_utils (module)
pyfusion.utils.host (module)
pyfusion.utils.net (module)
pyfusion.utils.primefactors (module)
pyfusion.utils.process_cmd_line_args (module)
pyfusion.utils.read_csv_data (module)
pyfusion.utils.regulator (module)
pyfusion.utils.tests (module)
pyfusion.utils.time_utils (module)
pyfusion.utils.utils (module)
pyfusion.version (module)
pyfusion.visual (module)
pyfusion.visual.chunk_plot (module)
pyfusion.visual.multi_line_plot (module)
pyfusion.visual.sp (module)
pyfusion.visual.subplots (module)
pyfusion.visual.vis (module)
pyfusion.visual.window_manager (module)
PyfusionConfigParser (class in pyfusion.conf)

R

raise_matching() (in module pyfusion.visual.window_manager)
read_config() (in module pyfusion.conf.utils)
read_csv_data() (in module pyfusion.utils.read_csv_data)
read_data_from_file() (in module pyfusion.acquisition.LHD.fetch)
read_dtype() (pyfusion.acquisition.binary.fetch.BinaryMultiChannelTimeseriesFetcher method)
read_igetfile() (in module pyfusion.acquisition.LHD.read_igetfile)
read_prm_file() (in module pyfusion.acquisition.LHD.fetch)
read_text_pyfusion() (in module pyfusion.acquisition.read_text_pyfusion)
reduce_time() (in module pyfusion.data.filters)
(pyfusion.data.base.DataSet method)
(pyfusion.data.timeseries.TimeseriesData method)
regenerate_dim() (in module pyfusion.acquisition.W7X.fetch)
register() (in module pyfusion.data.filters)
(in module pyfusion.data.plots)
(in module pyfusion.data.plots_1)
Regulator (class in pyfusion.utils.regulator)
remap_periodic() (in module pyfusion.data.utils)
remove() (pyfusion.data.base.BaseDataSet method)
remove_baseline() (in module pyfusion.data.filters)
(pyfusion.data.timeseries.TimeseriesData method)
remove_noncontiguous() (in module pyfusion.data.filters)
(pyfusion.data.base.DataSet method)
repopulate() (pyfusion.data.base.ChannelList method)
report_mem() (in module pyfusion.data.DA_datamining)
residuals() (in module pyfusion.data.fits)
(in module pyfusion.data.fits0)
(in module pyfusion.data.fits1)
(pyfusion.data.process_swept_Langmuir.LPfitter method)
restore_sin() (in module pyfusion.data.restore_sin)
retrieve_to_file() (in module pyfusion.acquisition.LHD.fetch)
return_non_freq_dependent() (in module pyfusion.clustering.extract_features_scans)
return_scan_details() (in module pyfusion.devices.H1.H1_scan_list)
(in module pyfusion.H1_scan_list_old)
return_time_values() (in module pyfusion.clustering.extract_features_scans)
return_values() (in module pyfusion.clustering.extract_features_scans)
rwm() (in module pyfusion.visual.window_manager)

S

save() (pyfusion.data.base.BaseData method)
(pyfusion.data.DA_datamining.DA method)
(pyfusion.data.base.BaseDataSet method)
(pyfusion.data.base.BaseOrderedDataSet method)
(pyfusion.data.base.Channel method)
(pyfusion.data.base.ChannelList method)
(pyfusion.data.base.Coords method)
(pyfusion.data.timeseries.FlucStruc method)
save_compress() (in module pyfusion.data.save_compress)
save_data() (pyfusion.utils.dist_mp.ThreadWorker method)
save_matching() (in module pyfusion.visual.window_manager)
save_wisdom() (in module pyfusion.utils.fftw3_bdb_utils)
segment() (in module pyfusion.data.filters)
(pyfusion.data.base.DataSet method)
(pyfusion.data.timeseries.TimeseriesData method)
self_cps() (pyfusion.data.timeseries.SVDData method)
set() (pyfusion.data.histogramHD.CoordHD method)
(pyfusion.data.histogramHD.CoordHDs method)
set_axis_if_OK() (in module pyfusion.data.plots)
setup() (pyfusion.acquisition.base.BaseDataFetcher method), [1]
setUp() (pyfusion.acquisition.MDSPlus.tests.MDSAcqTestCase method)
(pyfusion.acquisition.MDSPlus.tests.WebTestCase method)
setup() (pyfusion.acquisition.tests.DummyFetcher method)
(pyfusion.acquisition.W7X.fetch.W7XDataFetcher method)
setUp() (pyfusion.devices.H1.tests.H1DevTestCase method)
(pyfusion.devices.LHD.tests.LHDDeviceTestCase method)
(pyfusion.test.tests.NoSQLTestCase method)
(pyfusion.test.tests.SQLTestCase method)
setup_coords() (in module pyfusion.data.base)
setup_session() (pyfusion.orm.ORMManager method)
shot (pyfusion.acquisition.LHD.read_igetfile.igetfile attribute)
shot_gte() (in module pyfusion.data.shot_range)
shot_range() (in module pyfusion.data.shot_range)
show_covariances() (in module pyfusion.clustering.clustering)
shutdown_orm() (pyfusion.orm.ORMManager method)
sigma_eq_sigma_bar() (in module pyfusion.clustering.clustering)
Signal (class in pyfusion.acquisition.MDSPlus.h1ds)
(class in pyfusion.data.timeseries)
signal_from_binary_url() (in module pyfusion.acquisition.MDSPlus.h1ds)
simple_primefactors() (in module pyfusion.utils.primefactors)
simple_xml_value() (in module pyfusion.acquisition.MDSPlus.h1ds)
single_shot() (in module pyfusion.clustering.extract_features_scans)
single_shot_fluc_strucs() (in module pyfusion.clustering.extract_features_scans)
single_shot_svd_wrapper() (in module pyfusion.clustering.extract_features_scans)
single_shot_wrapper() (in module pyfusion.clustering.extract_features_scans)
SingleChannelSineFetcher (class in pyfusion.acquisition.FakeData.fetch), [1]
SingleChannelSineUniqueForShotFetcher (class in pyfusion.acquisition.FakeData.fetch)
size_val() (in module pyfusion.visual.sp)
slow (pyfusion.acquisition.MDSPlus.tests.CheckH1ConfigSection attribute)
(pyfusion.acquisition.MDSPlus.tests.CheckMDSPlusDataAcquisition attribute)
(pyfusion.acquisition.MDSPlus.tests.CheckMDSPlusDataFetchers attribute)
(pyfusion.acquisition.MDSPlus.tests.CheckMDSPlusH1Connection attribute)
(pyfusion.data.tests.CheckPlotSignals attribute)
(pyfusion.devices.H1.tests.CheckH1Device attribute)
(pyfusion.devices.H1.tests.CheckH1MirnovCoords attribute)
smooth() (in module pyfusion.data.signal_processing)
smooth_n() (in module pyfusion.data.signal_processing)
sp() (in module pyfusion.visual.sp)
sp_filter_butterworth_bandpass() (in module pyfusion.data.filters)
(pyfusion.data.timeseries.TimeseriesData method)
specgram() (in module pyfusion.data.specgram_fftw3)
split_names() (in module pyfusion.data.utils)
split_vectors() (in module pyfusion.data.write_arff)
splot() (in module pyfusion.data.signal_processing)
SQLConfigCheck (class in pyfusion.test.tests)
SQLTestCase (class in pyfusion.test.tests)
start() (pyfusion.utils.dist_mp.ThreadWorker method)
status() (pyfusion.utils.dist_mp.ThreadWorker method)
std() (pyfusion.clustering.modes.Mode method)
(pyfusion.clustering.modes_old.Mode method)
std_masked() (pyfusion.clustering.modes_old.Mode method)
store() (pyfusion.clustering.modes.Mode method)
(pyfusion.clustering.modes_old.Mode method)
storeM() (pyfusion.clustering.modes.Mode method)
(pyfusion.clustering.modes_old.Mode method)
sub() (pyfusion.data.plots.Energy method)
(pyfusion.data.plots_1.Energy method)
subdivide_interval() (in module pyfusion.data.utils)
subplots() (in module pyfusion.visual.subplots)
subtract_mean() (in module pyfusion.data.filters)
(pyfusion.data.base.DataSet method)
(pyfusion.data.timeseries.TimeseriesData method)
svd() (in module pyfusion.data.filters)
(pyfusion.data.timeseries.TimeseriesData method)
SVDData (class in pyfusion.data.timeseries)
svdplot() (in module pyfusion.data.plots)
(in module pyfusion.data.plots_1)
(pyfusion.data.timeseries.SVDData method)
svs() (pyfusion.data.timeseries.FlucStruc method)
swm() (in module pyfusion.visual.window_manager)

T

test() (in module pyfusion.acquisition.HeliotronJ.make_static_param_db)
test_acq() (pyfusion.acquisition.MDSPlus.tests.TestWebDataAcq method)
test_add_coords() (pyfusion.data.tests.CheckCoordinates method)
test_analytic_phase() (in module pyfusion.data.signal_processing)
test_base_class() (pyfusion.data.tests.CheckSignal method)
test_base_classes() (pyfusion.acquisition.FakeData.tests.CheckFakeDataFetchers method)
test_baseordereddataset_label() (pyfusion.data.tests.CheckDataSetLabels method)
test_channel_class() (pyfusion.data.tests.CheckChannels method)
test_channel_list() (pyfusion.data.tests.CheckChannelList method)
test_channellist_ORM() (pyfusion.data.tests.CheckChannelList method)
test_channels_SQL() (pyfusion.data.tests.CheckChannelsSQL method)
test_compress() (in module pyfusion.data.save_compress)
test_config_as_dict() (pyfusion.conf.tests.CheckConfigUtils method)
test_config_dtype() (pyfusion.acquisition.binary.test.CheckBinaryAcquisition method)
test_coord_transform() (pyfusion.data.tests.CheckCoordinates method)
test_correlate() (pyfusion.data.tests.CheckNumpyFilters method)
test_d_phase() (pyfusion.data.tests.CheckFloatDelta method)
test_dataset() (pyfusion.data.tests.CheckDataSet method)
(pyfusion.data.tests.CheckSegmentFilter method)
test_dataset_filter_copy() (pyfusion.data.tests.CheckFilterCopy method)
test_dataset_filter_nocopy() (pyfusion.data.tests.CheckFilterCopy method)
test_dataset_filters_2() (pyfusion.data.tests.CheckDataSet method)
test_dataset_label() (pyfusion.data.tests.CheckDataSetLabels method)
test_device() (pyfusion.devices.LHD.tests.CheckLHDDevice method)
test_device_getdata_single_shot() (pyfusion.devices.tests.TestDeviceGetdata method)
test_device_getdatat_multishot() (pyfusion.devices.tests.TestDeviceGetdata method)
test_device_keyword_args() (pyfusion.devices.tests.CheckDevice method)
test_device_no_config() (pyfusion.devices.tests.CheckDevice method)
test_different_timebase_exception() (pyfusion.acquisition.FakeData.tests.CheckMultiChannel method)
test_dphase_subset() (pyfusion.acquisition.binary.test.CheckBinaryMultiFileFetch method)
test_empty_device() (pyfusion.devices.tests.CheckEmptyDevice method)
test_equal_except_for() (pyfusion.utils.tests.CheckEqualExceptFor method)
test_flucstruc_phases() (pyfusion.data.tests.CheckFlucstrucPhases method)
(pyfusion.data.tests.CheckFlucstrucs method)
test_flucstruc_signals() (pyfusion.data.tests.CheckFlucstrucs method)
test_get_acquistion() (pyfusion.acquisition.tests.CheckGetAcquisition method)
test_get_coords_for_channel_config() (pyfusion.data.tests.CheckGetCoords method)
test_get_data() (pyfusion.acquisition.FakeData.tests.CheckFakeDataAcquisition method)
test_getdevice() (pyfusion.devices.H1.tests.CheckH1Device method)
test_getDevice() (pyfusion.devices.tests.CheckGetDevice method)
test_getDevice_from_pf() (pyfusion.devices.H1.tests.CheckGetH1Device method)
(pyfusion.devices.tests.CheckGetDevice method)
test_import_from_str() (pyfusion.conf.tests.CheckImportFromString method)
test_import_setting_with_fakedata_acquisition() (pyfusion.conf.tests.CheckImportSetting method)
test_kh() (pyfusion.devices.H1.tests.CheckH1Device method)
test_kwarg_config_handler() (pyfusion.conf.tests.CheckKeywordArgConfigHandler method)
test_kwargs_passed_to_channels() (pyfusion.acquisition.FakeData.tests.CheckMultiChannel method)
test_list_channels() (pyfusion.acquisition.FakeData.tests.CheckMultiChannel method)
test_load_h1() (pyfusion.devices.H1.tests.CheckH1Device method)
test_local_access() (pyfusion.acquisition.MDSPlus.tests.TestRefactoredMDSLocal method)
test_manager_reg() (pyfusion.orm.tests.CheckORMManager method)
test_multi_channel_timeseries() (pyfusion.data.tests.CheckSegmentFilter method)
test_multi_fetch() (pyfusion.acquisition.binary.test.CheckBinaryMultiFileFetch method)
test_multi_multichannel() (pyfusion.acquisition.FakeData.tests.CheckMultiChannel method)
test_multichannel_fakedata() (pyfusion.data.tests.CheckNormalise method)
test_multichannel_mirnov_bean_kappah_as_argument() (pyfusion.devices.H1.tests.CheckH1MirnovCoords method)
test_multichannel_mirnov_bean_kappah_from_metadata() (pyfusion.devices.H1.tests.CheckH1MirnovCoords method)
test_multichannel_single_channels() (pyfusion.acquisition.FakeData.tests.CheckMultiChannel method)
test_n_channels() (pyfusion.data.tests.CheckSignal method)
test_n_samples() (pyfusion.data.tests.CheckSignal method)
test_new_filter() (pyfusion.data.tests.CheckFilterMetaClass method)
test_ordered_dataset_ORM() (pyfusion.data.tests.CheckOrderedDataSet method)
test_orm() (pyfusion.orm.tests.CheckORM method)
test_ORM_floatdelta() (pyfusion.data.tests.CheckFloatDelta method)
test_ORM_flucstrucs() (pyfusion.data.tests.CheckFlucstrucs method)
test_orm_manager() (pyfusion.orm.tests.CheckORMManager method)
test_peak_freq() (pyfusion.data.tests.CheckUtils method)
test_pf_has_section() (pyfusion.conf.tests.CheckPyfusionConfigParser method)
test_pickles() (in module pyfusion.acquisition.W7X.get_shot_list)
test_plot_signals() (pyfusion.data.tests.CheckPlotSignals method)
test_reduce_time_dataset() (pyfusion.data.tests.CheckFilters method)
test_reduce_time_filter_multi_channel() (pyfusion.data.tests.CheckFilters method)
test_reduce_time_filter_multi_channel_attached_method() (pyfusion.data.tests.CheckFilters method)
test_reduce_time_filter_single_channel() (pyfusion.data.tests.CheckFilters method)
test_reload_config() (pyfusion.test.tests.SQLConfigCheck method)
test_remap_periodic() (pyfusion.data.tests.CheckUtils method)
test_remove_mean_dataset() (pyfusion.data.tests.CheckSubtractMeanFilter method)
test_remove_mean_multichanel() (pyfusion.data.tests.CheckSubtractMeanFilter method)
test_remove_mean_single_channel() (pyfusion.data.tests.CheckSubtractMeanFilter method)
test_remove_noncontiguous() (pyfusion.data.tests.CheckRemoveNonContiguousFilter method)
test_return_correct_type() (pyfusion.conf.tests.CheckVariableTypes method)
test_return_type() (pyfusion.acquisition.LHD.tests.TestLHDDataAcq method)
test_setup_pulldown() (pyfusion.acquisition.tests.CheckDataFetchers method)
test_shot_data() (pyfusion.acquisition.binary.test.CheckBinaryAcquisition method)
(pyfusion.acquisition.DSV.test.CheckDSVAcquisition method)
test_shot_flucstrucs() (pyfusion.data.tests.CheckShotFlucstrucs method)
test_single_channel_fakedata() (pyfusion.data.tests.CheckNormalise method)
test_single_channel_timeseries() (pyfusion.data.tests.CheckSegmentFilter method)
test_single_channel_with_kappah_supplied_through_metadata() (pyfusion.devices.H1.tests.CheckH1MirnovCoords method)
test_single_mirnov_channel_kappah_as_argument() (pyfusion.devices.H1.tests.CheckH1MirnovCoords method)
test_single_mirnov_channel_kappah_from_metadata() (pyfusion.devices.H1.tests.CheckH1MirnovCoords method)
test_singlechannelsinedf() (pyfusion.acquisition.FakeData.tests.CheckFakeDataFetchers method)
test_sp_filter_butterworth_bandpass() (pyfusion.data.tests.CheckSciPyFilters method)
test_specgram() (in module pyfusion.data.specgram_fftw3)
test_stored_metadata_data() (pyfusion.data.tests.CheckStoredMetaData method)
test_stored_metadata_datasets() (pyfusion.data.tests.CheckStoredMetaDataForDataSets method)
test_svd_data() (pyfusion.data.tests.CheckFlucstrucs method)
test_svd_plot() (pyfusion.data.tests.CheckPlotMethods method)
test_SVDData_class() (pyfusion.data.tests.CheckFlucstrucs method)
test_thick_client_access() (pyfusion.acquisition.MDSPlus.tests.TestRefactoredMDSThick method)
test_thin_client_access() (pyfusion.acquisition.MDSPlus.tests.TestRefactoredMDSThin method)
test_timebase() (pyfusion.data.tests.CheckTimebase method)
test_timebase_and_coords() (pyfusion.data.tests.CheckTimeseriesData method)
test_timebase_slice() (pyfusion.data.tests.CheckTimebase method)
test_timeseries_filter_copy() (pyfusion.data.tests.CheckFilterCopy method)
test_timeseries_filter_nocopy() (pyfusion.data.tests.CheckFilterCopy method)
test_von_mises_fits() (in module pyfusion.clustering.clustering)
testAcqAttrsConfig() (pyfusion.acquisition.tests.CheckAcquisitionArgs method)
testAcqAttrsConfigKwargs() (pyfusion.acquisition.tests.CheckAcquisitionArgs method)
testAcqAttrsKwargs() (pyfusion.acquisition.tests.CheckAcquisitionArgs method)
testBaseClass() (pyfusion.conf.tests.CheckPyfusionConfigParser method)
testBaseClasses() (pyfusion.acquisition.binary.test.CheckBinaryAcquisition method)
(pyfusion.acquisition.DSV.test.CheckDSVAcquisition method)
(pyfusion.acquisition.FakeData.tests.CheckFakeDataAcquisition method)
(pyfusion.acquisition.MDSPlus.tests.CheckMDSPlusDataAcquisition method)
(pyfusion.data.tests.CheckTimeseriesData method)
testClearConfig() (pyfusion.test.tests.ConfigLoaders method)
testdata() (pyfusion.acquisition.binary.test.CheckBinaryAcquisition method)
(pyfusion.acquisition.DSV.test.CheckDSVAcquisition method)
testDataFetcherBaseClass() (pyfusion.acquisition.MDSPlus.tests.CheckMDSPlusDataFetchers method)
testDeviceAcquisition() (pyfusion.devices.tests.CheckDevice method)
testDeviceConnection() (pyfusion.acquisition.FakeData.tests.CheckFakeDataAcquisition method)
TestDeviceGetdata (class in pyfusion.devices.tests)
testDummyFetcher() (pyfusion.acquisition.tests.CheckDataFetchers method)
testEmptyDevice() (pyfusion.test.tests.ConfigCheck method)
testEqualityConfigOrArgs() (pyfusion.acquisition.tests.CheckAcquisitionArgs method)
testFetcherShotArg() (pyfusion.acquisition.tests.CheckDataFetchers method)
testFilteredDataHistory_copy() (pyfusion.data.tests.CheckDataHistory method)
testFilteredDataHistory_nocopy() (pyfusion.data.tests.CheckDataHistory method)
testGetDataReturnObject() (pyfusion.acquisition.FakeData.tests.CheckFakeDataAcquisition method)
testH1Config() (pyfusion.acquisition.MDSPlus.tests.CheckH1ConfigSection method)
testH1Multichannel() (pyfusion.acquisition.MDSPlus.tests.CheckH1ConfigSection method)
testH1TimeseriesData() (pyfusion.acquisition.MDSPlus.tests.CheckMDSPlusH1Connection method)
testHaveMDSPlusDataObject() (pyfusion.acquisition.MDSPlus.tests.CheckMDSPlusDataAcquisition method)
testImportgetAcquisition() (pyfusion.test.tests.InitImports method)
testImportgetDevice() (pyfusion.test.tests.InitImports method)
TestLHDDataAcq (class in pyfusion.acquisition.LHD.tests)
testListedDeviceDatabase() (pyfusion.test.tests.ConfigCheck method)
testListedDevices() (pyfusion.test.tests.ConfigCheck method)
testModules() (pyfusion.acquisition.tests.CheckAcquisitionModules method)
testNewData() (pyfusion.data.tests.CheckDataHistory method)
testORM() (pyfusion.devices.tests.CheckDevice method)
testPing() (pyfusion.utils.tests.CheckPing method)
testReadConfig() (pyfusion.test.tests.ConfigLoaders method)
TestRefactoredMDSLocal (class in pyfusion.acquisition.MDSPlus.tests)
TestRefactoredMDSThick (class in pyfusion.acquisition.MDSPlus.tests)
TestRefactoredMDSThin (class in pyfusion.acquisition.MDSPlus.tests)
testSectionNames() (pyfusion.conf.tests.CheckConfigFileSectionNames method)
testSQLConfig() (pyfusion.test.tests.SQLConfigCheck method)
testUnlistedDevice() (pyfusion.test.tests.ConfigCheck method)
TestWebDataAcq (class in pyfusion.acquisition.MDSPlus.tests)
ThreadWorker (class in pyfusion.utils.dist_mp)
Timebase (class in pyfusion.data.timeseries)
TimeseriesData (class in pyfusion.data.timeseries)
TJII (class in pyfusion.devices.TJII.device)
TJIIAcquisition (class in pyfusion.acquisition.TJII.acq)
TJIIDataFetcher (class in pyfusion.acquisition.TJII.fetch)
to_sqlalchemy() (pyfusion.data.DA_datamining.DA method)
tog() (in module pyfusion.data.process_swept_Langmuir)
(in module pyfusion.data.process_swept_Langmuir_1)
(in module pyfusion.visual.sp)
tomagphase() (in module pyfusion.data.write_arff)
transform() (pyfusion.data.base.BaseCoordTransform method)
(pyfusion.data.tests.DummyCoordTransform method)
(pyfusion.devices.H1.coords.MirnovKhMagneticCoordTransform method)
(pyfusion.devices.LHD.coords.LHDConvenienceCoordTransform method)
try_discretise_array() (in module pyfusion.data.save_compress)
try_fetch_local() (in module pyfusion.acquisition.base)
tryone() (in module pyfusion.data.process_swept_Langmuir)
(in module pyfusion.data.process_swept_Langmuir_1)
twopi() (in module pyfusion.clustering.modes)
(in module pyfusion.clustering.modes_old)

U

uniform() (in module pyfusion.data.write_arff)
unique_id() (in module pyfusion.data.utils)
UnknownVariableTypeError
update() (pyfusion.data.base.BaseDataSet method)
(pyfusion.data.DA_datamining.DA method)
utc_ns() (in module pyfusion.utils.time_utils)

V

vardict (pyfusion.acquisition.LHD.read_igetfile.igetfile attribute)
vis() (in module pyfusion.visual.vis)

W

W7AS (class in pyfusion.devices.W7AS.device)
W7X (class in pyfusion.devices.W7X.device)
W7XAcquisition (class in pyfusion.acquisition.W7X.acq)
W7XDataFetcher (class in pyfusion.acquisition.W7X.fetch)
wait() (pyfusion.utils.regulator.Regulator method)
warn() (in module pyfusion.utils.utils)
WebTestCase (class in pyfusion.acquisition.MDSPlus.tests)
whr() (in module pyfusion.data.convenience)
write_arff() (in module pyfusion.data.write_arff)
(pyfusion.data.DA_datamining.DA method)
write_DA() (pyfusion.data.process_swept_Langmuir.Langmuir_data method)